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sfari
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Traffic rank#219,025 Site Rank
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Site age17 yrs old
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Traffic rank
#219,025
#219,025
Site age
17 yrs
17 yrs
Location
United States
United States
Newest job postings for sfari
via LinkedIn
posted_at: 27 days agoschedule_type: Full-time
POSITION SUMMARY
SFARI Cohorts and Data Collections...
Since its beginning, SFARI (Simons Foundation Autism Research Initiative) has partnered with families and clinical centers across the country to build large and diverse cohorts of well-characterized individuals with autism or with specific genetic alterations associated with neurodevelopmental risk. These include the Simons Simplex Collection (SSC), Simons Searchlight, Autism Inpatient Collection,
POSITION SUMMARY
SFARI Cohorts and Data Collections...
Since its beginning, SFARI (Simons Foundation Autism Research Initiative) has partnered with families and clinical centers across the country to build large and diverse cohorts of well-characterized individuals with autism or with specific genetic alterations associated with neurodevelopmental risk. These include the Simons Simplex Collection (SSC), Simons Searchlight, Autism Inpatient Collection, and SPARK. The principles of community-based participatory research have been key to all cohort activities. The Simons Foundation Informatics group manages the collection and distribution of large-scale aggregate and deidentified clinical and genomic data from these cohorts, which are made available to autism researchers through SFARI Base, a clearinghouse for autism and autism-related research data and biospecimens supported by SFARI.
Bioinformatics Data Manager
The Bioinformatics group at the Simons Foundation is seeking a dedicated full-time bioinformatics data manager. The ideal candidate has outstanding attention to detail, with experience in data science or bioinformatics, and will be at the forefront of the Foundation’s open data initiatives.
This critical position is responsible for overseeing an extensive and ever-expanding collection of genomics (over 170K whole-exomes and genomes) and biomedical data across Simons Foundation autism cohorts and neuroscience collaborations. The data manager will be instrumental in enhancing data accessibility and utility for both internal staff and external investigators, aligning with the principles of open data and science. The data manager will be part of the bioinformatics team and will collaborate with informatics' engineering team, the SFARI science team, and external investigators.
Key responsibilities include meticulous handling and processing of incoming data, such as genomic sequencing or biosensor data, as well as performing detailed quality control checks and downstream bioinformatics analyses. Additionally, the candidate will be responsible for preparing regular data releases and facilitating coordination among different teams, contributing to the Foundation’s dynamic and collaborative environment.
ESSENTIAL FUNCTIONS/RESPONSIBILITIES
Data releases
• Maintain the Bioinformatics quality control pipeline, used to verify consistency with phenotypic data and ensure the integrity of released genomic data
• Execute existing variant calling pipelines, which will be included in data releases
• Package whole-exome and whole-genome data for regular curated and rapid releases
• Manage ad hoc genetic data releases for various SFARI cohorts and datasets
Data organization
• Coordinate data receipt from external investigators, vendors, and research groups
• Perform incoming data cleaning, including deidentifying sample identifiers, organizing data files, and ensuring consistent metadata
• Manage the organization of raw, cleaned, and released data on our local cluster environment
• Harmonize our large collection of heterogeneous datasets hosted on SFARI Base
Data sharing and support
• Support data sharing for SFARI investigators and collaborations, such as the Autism Rat Consortium (ARC), and Simons Sex Differences Collaboration (SSDC)
• Respond promptly to dataset questions from external investigators
• Support data access for cloud platforms
MINIMUM QUALIFICATIONS
Education
• B.S. or M.S. in data science, bioinformatics, or a related discipline.
Required Experience
• At least 4+ years’ relevant work experience
• Extensive experience with Linux/bash
• Experience working in an HPC environment
• Experience with Python
• Experience with version control using git / GitHub
• Basic skills in data analysis and statistics
• Strong organizational skills and outstanding attention to detail
• Effective oral and written communicator
• Ability to thrive in collaborative environments
Desired Experience
• Enthusiasm for open science and collaboration
• Experience with genomics data processing and analysis
• Experience writing technical documentation
• Experience with cloud storage solutions (AWS, Google Cloud, Terra)
• Working knowledge of SQL
• Familiarity with data privacy and security regulations in the healthcare or research domain
REQUIRED APPLICATION MATERIALS
• Resume
• Cover letter stating your interest in the position.
• Links to code repositories or GitHub, if available
COMPENSATION AND BENEFITS
• The full-time annual compensation range for this position is $130,000 – $145,000, depending on experience.
• In addition to competitive salaries, the Simons Foundation provides employees with an outstanding benefits package.
THE SIMONS FOUNDATION'S DIVERSITY COMMITMENT
Many of the greatest ideas and discoveries come from a diverse mix of minds, backgrounds and experiences, and we are committed to cultivating an inclusive work environment. The Simons Foundation actively seeks a diverse applicant pool and encourages candidates of all backgrounds to apply. We provide equal opportunities to all employees and applicants for employment without regard to race, religion, color, age, sex, national origin, sexual orientation, gender identity, genetic disposition, neurodiversity, disability, veteran status, or any other protected category under federal, state and local law Show more details...
SFARI Cohorts and Data Collections...
Since its beginning, SFARI (Simons Foundation Autism Research Initiative) has partnered with families and clinical centers across the country to build large and diverse cohorts of well-characterized individuals with autism or with specific genetic alterations associated with neurodevelopmental risk. These include the Simons Simplex Collection (SSC), Simons Searchlight, Autism Inpatient Collection, and SPARK. The principles of community-based participatory research have been key to all cohort activities. The Simons Foundation Informatics group manages the collection and distribution of large-scale aggregate and deidentified clinical and genomic data from these cohorts, which are made available to autism researchers through SFARI Base, a clearinghouse for autism and autism-related research data and biospecimens supported by SFARI.
Bioinformatics Data Manager
The Bioinformatics group at the Simons Foundation is seeking a dedicated full-time bioinformatics data manager. The ideal candidate has outstanding attention to detail, with experience in data science or bioinformatics, and will be at the forefront of the Foundation’s open data initiatives.
This critical position is responsible for overseeing an extensive and ever-expanding collection of genomics (over 170K whole-exomes and genomes) and biomedical data across Simons Foundation autism cohorts and neuroscience collaborations. The data manager will be instrumental in enhancing data accessibility and utility for both internal staff and external investigators, aligning with the principles of open data and science. The data manager will be part of the bioinformatics team and will collaborate with informatics' engineering team, the SFARI science team, and external investigators.
Key responsibilities include meticulous handling and processing of incoming data, such as genomic sequencing or biosensor data, as well as performing detailed quality control checks and downstream bioinformatics analyses. Additionally, the candidate will be responsible for preparing regular data releases and facilitating coordination among different teams, contributing to the Foundation’s dynamic and collaborative environment.
ESSENTIAL FUNCTIONS/RESPONSIBILITIES
Data releases
• Maintain the Bioinformatics quality control pipeline, used to verify consistency with phenotypic data and ensure the integrity of released genomic data
• Execute existing variant calling pipelines, which will be included in data releases
• Package whole-exome and whole-genome data for regular curated and rapid releases
• Manage ad hoc genetic data releases for various SFARI cohorts and datasets
Data organization
• Coordinate data receipt from external investigators, vendors, and research groups
• Perform incoming data cleaning, including deidentifying sample identifiers, organizing data files, and ensuring consistent metadata
• Manage the organization of raw, cleaned, and released data on our local cluster environment
• Harmonize our large collection of heterogeneous datasets hosted on SFARI Base
Data sharing and support
• Support data sharing for SFARI investigators and collaborations, such as the Autism Rat Consortium (ARC), and Simons Sex Differences Collaboration (SSDC)
• Respond promptly to dataset questions from external investigators
• Support data access for cloud platforms
MINIMUM QUALIFICATIONS
Education
• B.S. or M.S. in data science, bioinformatics, or a related discipline.
Required Experience
• At least 4+ years’ relevant work experience
• Extensive experience with Linux/bash
• Experience working in an HPC environment
• Experience with Python
• Experience with version control using git / GitHub
• Basic skills in data analysis and statistics
• Strong organizational skills and outstanding attention to detail
• Effective oral and written communicator
• Ability to thrive in collaborative environments
Desired Experience
• Enthusiasm for open science and collaboration
• Experience with genomics data processing and analysis
• Experience writing technical documentation
• Experience with cloud storage solutions (AWS, Google Cloud, Terra)
• Working knowledge of SQL
• Familiarity with data privacy and security regulations in the healthcare or research domain
REQUIRED APPLICATION MATERIALS
• Resume
• Cover letter stating your interest in the position.
• Links to code repositories or GitHub, if available
COMPENSATION AND BENEFITS
• The full-time annual compensation range for this position is $130,000 – $145,000, depending on experience.
• In addition to competitive salaries, the Simons Foundation provides employees with an outstanding benefits package.
THE SIMONS FOUNDATION'S DIVERSITY COMMITMENT
Many of the greatest ideas and discoveries come from a diverse mix of minds, backgrounds and experiences, and we are committed to cultivating an inclusive work environment. The Simons Foundation actively seeks a diverse applicant pool and encourages candidates of all backgrounds to apply. We provide equal opportunities to all employees and applicants for employment without regard to race, religion, color, age, sex, national origin, sexual orientation, gender identity, genetic disposition, neurodiversity, disability, veteran status, or any other protected category under federal, state and local law Show more details...
via ZipRecruiter
posted_at: 1 month agoschedule_type: Part-time and Internshipsalary: 20–25 an hour
POSITION SUMMARY
This internship is part of the Simons Foundation's Autism in the Workplace program. We strongly encourage autistic candidates to apply. Our program includes support for interns and guidance for hiring teams in order to make the internship a successful and rewarding experience...
We are seeking a motivated and enthusiastic individual to join our team as a Linux Systems Administrator Intern. This internship provides a unique opportunity
POSITION SUMMARY
This internship is part of the Simons Foundation's Autism in the Workplace program. We strongly encourage autistic candidates to apply. Our program includes support for interns and guidance for hiring teams in order to make the internship a successful and rewarding experience...
We are seeking a motivated and enthusiastic individual to join our team as a Linux Systems Administrator Intern. This internship provides a unique opportunity for beginners to gain hands-on experience in managing and maintaining Linux-based systems using the command line, using Github to version control code, and deploy a WordPress website. This internship offers a valuable opportunity to learn about real-world projects while working closely with experienced professionals in the field.
This is a ten week onsite internship at our New York City offices. The intern will work 18 hours per week starting in June 2024.
Learn more about summer internships at Simons Foundation here: https://www.simonsfoundation.org/summer-at-simons.
ESSENTIAL FUNCTIONS/RESPONSIBILITIES
• Create a version controlled code repository for application code and create a deployment process.
• Create and manage a Linux-based virtual computer server, add/remove software packages, and apply system updates when available, schedule tasks, and run services.
• Collaborate with the team to deploy and update software applications on Linux platforms.
• Work on simple shell scripts to automate basic system administration tasks, and code deployment.
• Document system configurations, procedures, and troubleshooting steps.
MINIMUM QUALIFICATIONS
• Basic knowledge of git version control, and using Github for code.
• Familiarity with fundamental command-line operations and shell scripting.
• Basic understanding of Linux operating systems (Ubuntu, RedHat, etc).
• Strong problem-solving skills and attention to detail.
• Ability to work independently and also collaboratively in a team-oriented environment.
• Excellent written communication skills and eagerness to learn.
REQUIRED APPLICATION MATERIALS
• Please submit a résumé and 1-2 paragraphs in a separate document stating your interest in the internship and the Autism in the Workplace program (approximately 150 words).
• If selected to move forward, we will have our partner, Integrate Autism Employment Advisors, contact you to continue the process which may include a take-home technical assignment
COMPENSATION
• This internship pays $20 to $25 per hour, depending on experience.
ABOUT THE CLOUD TEAM @ SIMONS
The Cloud Team supports various projects and web properties at the Foundation such as the famed Quanta Magazine online publication, the Foundation website, and SFARI funded SPARKforAutism to name a few. We work closely with various teams to assist them in building, deploying, and maintaining applications at scale on the internet. We also provide and maintain security in the cloud for much of the data that is generated by various projects powered by the Foundation.
THE SIMONS FOUNDATION'S DIVERSITY COMMITMENT
Many of the greatest ideas and discoveries come from a diverse mix of minds, backgrounds and experiences, and we are committed to cultivating an inclusive work environment. The Simons Foundation actively seeks a diverse applicant pool and encourages candidates of all backgrounds to apply. We provide equal opportunities to all employees and applicants for employment without regard to race, religion, color, age, sex, national origin, sexual orientation, gender identity, genetic disposition, neurodiversity, disability, veteran status, or any other protected category under federal, state and local law Show more details...
This internship is part of the Simons Foundation's Autism in the Workplace program. We strongly encourage autistic candidates to apply. Our program includes support for interns and guidance for hiring teams in order to make the internship a successful and rewarding experience...
We are seeking a motivated and enthusiastic individual to join our team as a Linux Systems Administrator Intern. This internship provides a unique opportunity for beginners to gain hands-on experience in managing and maintaining Linux-based systems using the command line, using Github to version control code, and deploy a WordPress website. This internship offers a valuable opportunity to learn about real-world projects while working closely with experienced professionals in the field.
This is a ten week onsite internship at our New York City offices. The intern will work 18 hours per week starting in June 2024.
Learn more about summer internships at Simons Foundation here: https://www.simonsfoundation.org/summer-at-simons.
ESSENTIAL FUNCTIONS/RESPONSIBILITIES
• Create a version controlled code repository for application code and create a deployment process.
• Create and manage a Linux-based virtual computer server, add/remove software packages, and apply system updates when available, schedule tasks, and run services.
• Collaborate with the team to deploy and update software applications on Linux platforms.
• Work on simple shell scripts to automate basic system administration tasks, and code deployment.
• Document system configurations, procedures, and troubleshooting steps.
MINIMUM QUALIFICATIONS
• Basic knowledge of git version control, and using Github for code.
• Familiarity with fundamental command-line operations and shell scripting.
• Basic understanding of Linux operating systems (Ubuntu, RedHat, etc).
• Strong problem-solving skills and attention to detail.
• Ability to work independently and also collaboratively in a team-oriented environment.
• Excellent written communication skills and eagerness to learn.
REQUIRED APPLICATION MATERIALS
• Please submit a résumé and 1-2 paragraphs in a separate document stating your interest in the internship and the Autism in the Workplace program (approximately 150 words).
• If selected to move forward, we will have our partner, Integrate Autism Employment Advisors, contact you to continue the process which may include a take-home technical assignment
COMPENSATION
• This internship pays $20 to $25 per hour, depending on experience.
ABOUT THE CLOUD TEAM @ SIMONS
The Cloud Team supports various projects and web properties at the Foundation such as the famed Quanta Magazine online publication, the Foundation website, and SFARI funded SPARKforAutism to name a few. We work closely with various teams to assist them in building, deploying, and maintaining applications at scale on the internet. We also provide and maintain security in the cloud for much of the data that is generated by various projects powered by the Foundation.
THE SIMONS FOUNDATION'S DIVERSITY COMMITMENT
Many of the greatest ideas and discoveries come from a diverse mix of minds, backgrounds and experiences, and we are committed to cultivating an inclusive work environment. The Simons Foundation actively seeks a diverse applicant pool and encourages candidates of all backgrounds to apply. We provide equal opportunities to all employees and applicants for employment without regard to race, religion, color, age, sex, national origin, sexual orientation, gender identity, genetic disposition, neurodiversity, disability, veteran status, or any other protected category under federal, state and local law Show more details...
via Salary.com
schedule_type: Full-time
POSITION SUMMARY The Simons Foundation is seeking a Tax Manager to join the accounting and reporting team. The Tax Manager will report to the Senior Manager of Finance and will be responsible for supporting the full tax cycle, with an emphasis on compliance, investments, and other technically complex areas. This is a full-time position based in our offices in New York City. For more information... about the Simons Foundation visit simonsfoundation.org/careers.
POSITION SUMMARY The Simons Foundation is seeking a Tax Manager to join the accounting and reporting team. The Tax Manager will report to the Senior Manager of Finance and will be responsible for supporting the full tax cycle, with an emphasis on compliance, investments, and other technically complex areas. This is a full-time position based in our offices in New York City. For more information... about the Simons Foundation visit simonsfoundation.org/careers. ESSENTIAL FUNCTIONS/RESPONSIBILITIES Manage all aspects of the tax cycle, with a focus on the annual form 990-PF and 990-T filings for two entities, along with related quarterly estimates, extensions and accompanying forms. Partner with external tax prepares for successful filing of all federal and state returns. Maintain internal tax schedules and compliance processes and provide requested items to external tax preparers. Responsible for recording, tracking and analyzing investment activity for tax and GAAP reporting. Maintain cost-basis investment schedules and calculate realized gains for tax purposes. Analyze incoming K-1s and similar investment schedules for the purpose of calculating the Foundation’s taxes. Monitor the foundation’s activities for compliance with IRS rules for private foundations, and escalate as appropriate. Collaborate with cross-functional teams on Foundation-wide compliance initiatives. Maintain tax- and compliance-specific records, including disqualified persons and self-dealing, minimum distributions, excess business holdings, jeopardizing investments, and taxable expenditures. Manage recurring tax reporting requirements and respond to external requests, inclusive of tax notices, regulatory filings and surveys. Monitor and calculate unrelated business taxable income (“UBTI”) generated by the Foundation’s activities. Maintain and analyze tax-specific accounts used to track UBTI, grant disbursements subject to expenditure responsibility requirements and other similar accounts required for regulatory reporting. Remain current on US GAAP, IRS regulations and other regulatory developments impacting private foundations. Research technical accounting and tax issues and draft accounting memos to document complex matters/decisions. Coordinate with management, external auditors and tax accountants where appropriate. Support ongoing efforts to improve processes and automate manual tasks. Propose strategies to make operations more efficient. Take on any additional responsibilities or special projects as needed. MINIMUM QUALIFICATIONS Education Bachelor’s degree in accounting, tax, finance or business is preferred. Other degrees will be considered based on level of relevant experience. CPA or CPA license in progress Experience At least five years of relevant tax and accounting experience is required. Experience with larger organizations with varied lines of business, and experience with complex investment portfolios is preferred. Experience with exempt organizations, either in public accounting or in industry is preferred. Experience with private foundations and familiarity with Chapter 42 excise taxes is a plus. Related Skills & Other Requirements Must possess strong verbal and written communication skills Must be detail oriented with strong organizational, analytical and problem-solving skills Must demonstrate initiative and critical-thinking skills and the ability to prioritize workload to deliver high-quality results on time Adaptive to a dynamic, rapidly growing work environment Strong team player while also having ability to manage work independently COMPENSATION AND BENEFITS The full-time annual compensation range is $100,000 - $130,000 depending on experience. In addition to competitive salaries, the Simons Foundation provides employees with an outstanding benefits package. THE SIMONS FOUNDATION'S DIVERSITY COMMITMENT Many of the greatest ideas and discoveries come from a diverse mix of minds, backgrounds and experiences, and we are committed to cultivating an inclusive work environment. The Simons Foundation actively seeks a diverse applicant pool and encourages candidates of all backgrounds to apply. We provide equal opportunities to all employees and applicants for employment without regard to race, religion, color, age, sex, national origin, sexual orientation, gender identity, genetic disposition, neurodiversity, disability, veteran status, or any other protected category under federal, state and local law. The Simons Foundation is a private foundation established in 1994 in New York City by Jim and Marilyn Simons. With an annual grants and programs budget of $450 million, the foundation’s mission is to advance the frontiers of research in mathematics and the basic sciences. The foundation pursues its mission through its grant-making division, comprising programs in Mathematics & Physical Sciences, Life Sciences, Education & Outreach and autism research, and through its internal research division, the Flatiron Institute. The Mathematics & Physical Sciences program supports work in mathematics, theoretical computer science and theoretical physics. The Life Sciences program works to advance basic research in life sciences, with, among other efforts, large grant programs in ocean ecology and in the origins of life. The Simons Foundation Autism Research Initiative (SFARI) is a campaign that aims to improve the understanding, diagnosis and treatment of autism by funding innovative research of the highest quality and relevance. SFARI also supports the editorially independent autism research news site Spectrum. In 2016, the foundation launched the Flatiron Institute (FI), a multidisciplinary institute whose mission is to advance scientific research through computational methods, including data analysis, modeling and simulation. The FI hosts scientists and collaborating expert programmers who work to create, deploy and support new state-of-the-art computational methods. Outreach & Education supports and promotes scientific literacy in society generally. Specifically, the program supports the nonprofit Math for America and the independent science news site, Quanta Magazine. This program’s Science Sandbox initiative seeks to unlock scientific thinking in all people, so that science becomes a more integral part of culture. Visit the Simons Foundation career page at simonsfoundation.org/careers to learn more. SALARY AND BENEFITS In addition to competitive salaries, the Simons Foundation provides employees with an outstanding benefits package. SIMONS FOUNDATION'S DIVERSITY COMMITMENT Many of the greatest ideas and discoveries come from a diverse mix of minds, backgrounds and experiences, and we are committed to cultivating an inclusive work environment. The Simons Foundation actively seeks a diverse applicant pool and encourages candidates of all backgrounds to apply. We provide equal opportunities to all employees and applicants for employment without regard to race, religion, color, age, sex, national origin, sexual orientation, gender identity, genetic disposition, neurodiversity, disability, veteran status, or any other protected category under federal, state and local law. E-VERIFY Simons Foundation participates in E-Verify. Learn more here
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